Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs10188193 | chr2:178120391 | T/C | 2.21E-6 | 207 | 11.43 | 14.1 | 16.47 | KM Plot |
| KIRP | rs1021379 | chr1:212700204 | A/G | 3.22E-7 | 214 | 10.63 | 16.53 | 16.43 | KM Plot |
| KIRP | rs10408164 | chr19:419407 | C/T | 0.000684 | 214 | 16.43 | 15.77 | 10.48 | KM Plot |
| KIRP | rs10438587 | chr16:4522160 | C/T | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
| KIRP | rs10438588 | chr16:4522270 | C/G | 3.74E-6 | 213 | 16.47 | 12.63 | 10.83 | KM Plot |
| KIRP | rs1045763 | chr16:724084 | C/T | 1.92E-11 | 214 | 15.88 | 20.4 | 0.43 | KM Plot |
| KIRP | rs10458656 | chr10:75592662 | A/G | 0 | 212 | 14.53 | 19.83 | 4.82 | KM Plot |
| KIRP | rs10465758 | chr1:95278599 | T/C | 1.07E-6 | 207 | 11.2 | 14.87 | 16.53 | KM Plot |
| KIRP | rs10484399 | chr6:27534528 | A/G | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs1048443 | chr1:89521841 | G/C | 2.45E-5 | 206 | 16.73 | 19.45 | 10 | KM Plot |
| KIRP | rs10488806 | chr11:35005902 | A/T | 0 | 214 | 16.43 | 15.48 | 3.83 | KM Plot |
| KIRP | rs10493821 | chr1:89475135 | C/T | 0.000113 | 214 | 17 | 15.9 | 10.23 | KM Plot |
| KIRP | rs10493822 | chr1:89529680 | A/G | 8.67E-5 | 204 | 16.97 | 18.47 | 9.77 | KM Plot |
| KIRP | rs10493874 | chr1:95266433 | A/G | 0.000454 | 214 | 16.5 | 14.83 | 13.17 | KM Plot |
| KIRP | rs10497511 | chr2:178119296 | G/A | 1.99E-6 | 209 | 11.43 | 14.1 | 16.47 | KM Plot |